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1

Dosage Compensation in Drosophila

Lucchesi, John C., Kuroda, Mitzi I.

Journal:

Cold Spring Harbor Perspectives in Biology

Year:

2015

Language:

english

File:

PDF, 1.72 MB

english, 2015

2

X chromosome dosage compensation in Drosophila

Mitzi I. Kuroda, Melanie J. Palmer, John C. Lucchesi

Journal:

Seminars in Developmental Biology

Year:

1993

File:

PDF, 606 KB

1993

3

RNA-dependent association of the Drosophila maleless protein with the male X chromosome

Liz Richter, James R. Bone, Mitzi I. Kuroda

Journal:

Year:

1996

Language:

english

File:

PDF, 2.97 MB

english, 1996

4

10.1038/35040556

Ruvkun, Gary, Pasquinelli, Amy E., Reinhart, Brenda J., Slack, Frank, Martindale, Mark Q., Kuroda, Mitzi I., Maller, Betsy, Hayward, David C., Ball, Eldon E., Degnan, Bernard, Müller, Peter, Spring, J

Journal:

Year:

2000

Language:

english

File:

PDF, 196 KB

english, 2000

5

Sex lethal controls dosage compensation in Drosophila by a non-splicing mechanism

Kelley, Richard L., Wang, Jiwu, Bell, Leslie, Kuroda, Mitzi I.

Journal:

Year:

1997

File:

PDF, 1.47 MB

1997

6

X chromosome dosage compensation via enhanced transcriptional elongation in Drosophila

Larschan, Erica, Bishop, Eric P., Kharchenko, Peter V., Core, Leighton J., Lis, John T., Park, Peter J., Kuroda, Mitzi I.

Journal:

Year:

2011

Language:

english

File:

PDF, 282 KB

english, 2011

7

The MSL3 chromodomain directs a key targeting step for dosage compensation of the Drosophila melanogaster X chromosome

Sural, Tuba H, Peng, Shouyong, Li, Bing, Workman, Jerry L, Park, Peter J, Kuroda, Mitzi I

Journal:

Nature Structural and Molecular Biology

Year:

2008

Language:

english

File:

PDF, 1.32 MB

english, 2008

8

Drosophila MSL complex globally acetylates H4K16 on the male X chromosome for dosage compensation

Gelbart, Marnie E, Larschan, Erica, Peng, Shouyong, Park, Peter J, Kuroda, Mitzi I

Journal:

Nature Structural and Molecular Biology

Year:

2009

Language:

english

File:

PDF, 975 KB

english, 2009

9

Sequence-specific targeting of MSL complex regulates transcription of the roX RNA genes

Bai, Xiaoying, Alekseyenko, Artyom A, Kuroda, Mitzi I

Journal:

The EMBO Journal

Year:

2004

Language:

english

File:

PDF, 388 KB

english, 2004

10

Dosage compensation in drosophila: Sequence-specific initiation and sequence-independent spreading of MSL complex to the active genes on the male X chromosome

Andrey A. Gorchakov, Artyom A. Alekseyenko, Peter V. Kharchenko, Peter J. Park, Mitzi I. Kuroda

Journal:

Russian Journal of Genetics

Year:

2010

Language:

english

File:

PDF, 206 KB

english, 2010

11

Complex formation by the Drosophila MSL proteins: role of the MSL2 RING finger in protein complex assembly

Copps, Kyle, Richman, Ron, Lyman, Laura M., Chang, Kimberly A., Rampersad-Ammons, Joanne, Kuroda, Mitzi I.

Journal:

The EMBO Journal

Year:

1998

Language:

english

File:

PDF, 542 KB

english, 1998

12

Multiple Classes of MSL Binding Sites Target Dosage Compensation to the X Chromosome of Drosophila

Hyangyee Oh, James R Bone, Mitzi I Kuroda

Journal:

Current Biology

Year:

2004

Language:

english

File:

PDF, 426 KB

english, 2004

13

Guilt by association: non-coding RNAs, chromosome-specific proteins and dosage compensation in Drosophila

Carsten Stuckenholz, Yuji Kageyama, Mitzi I Kuroda

Journal:

Trends in Genetics

Year:

1999

Language:

english

File:

PDF, 253 KB

english, 1999

14

Quantized correlation coefficient for measuring reproducibility of ChIP-chip data

Shouyong Peng, Mitzi I Kuroda, Peter J Park

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 673 KB

english, 2010

15

Normalization and experimental design for ChIP-chip data

Shouyong Peng, Artyom A Alekseyenko, Erica Larschan, Mitzi I Kuroda, Peter J Park

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 1.39 MB

english, 2007

16

Noncoding RNAs and Intranuclear Positioning in Monoallelic Gene Expression

Pok Kwan Yang, Mitzi I. Kuroda

Journal:

Year:

2007

Language:

english

File:

PDF, 428 KB

english, 2007

17

A Sequence Motif within Chromatin Entry Sites Directs MSL Establishment on the Drosophila X Chromosome

Artyom A. Alekseyenko, Shouyong Peng, Erica Larschan, Andrey A. Gorchakov, Ok-Kyung Lee, Peter Kharchenko, Sean D. McGrath, Charlotte I. Wang, Elaine R. Mardis, Peter J. Park, Mitzi I. Kuroda

Journal:

Year:

2008

Language:

english

File:

PDF, 1.27 MB

english, 2008

18

MSL Complex Is Attracted to Genes Marked by H3K36 Trimethylation Using a Sequence-Independent Mechanism

Erica Larschan, Artyom A. Alekseyenko, Andrey A. Gortchakov, Shouyong Peng, Bing Li, Pok Yang, Jerry L. Workman, Peter J. Park, Mitzi I. Kuroda

Journal:

Year:

2007

Language:

english

File:

PDF, 2.03 MB

english, 2007

19

Noncoding RNA Genes in Dosage Compensation and Imprinting

Richard L Kelley, Mitzi I Kuroda

Journal:

Year:

2000

Language:

english

File:

PDF, 94 KB

english, 2000

20

roX1 RNA Paints the X Chromosome of Male Drosophila and Is Regulated by the Dosage Compensation System

Victoria H Meller, Kwok Hang Wu, Gregg Roman, Mitzi I Kuroda, Ronald L Davis

Journal:

Year:

1997

Language:

english

File:

PDF, 4.61 MB

english, 1997

21

Epigenetic Spreading of the Drosophila Dosage Compensation Complex from roX RNA Genes into Flanking Chromatin

Richard L Kelley, Victoria H Meller, Polina R Gordadze, Gregg Roman, Ronald L Davis, Mitzi I Kuroda

Journal:

Year:

1999

Language:

english

File:

PDF, 314 KB

english, 1999

22

Transient Xist-ence

Mitzi I. Kuroda, Victoria H. Meller

Journal:

Year:

1997

Language:

english

File:

PDF, 36 KB

english, 1997

23

The role of chromosomal RNAs in marking the X for dosage compensation

Richard L Kelley, Mitzi I Kuroda

Journal:

Current Opinion in Genetics & Development

Year:

2000

Language:

english

File:

PDF, 115 KB

english, 2000

24

Sequence-Specific Targeting of Drosophila roX Genes by the MSL Dosage Compensation Complex

Yongkyu Park, Gabrielle Mengus, Xiaoying Bai, Yuji Kageyama, Victoria H Meller, Peter B Becker, Mitzi I Kuroda

Journal:

Year:

2003

Language:

english

File:

PDF, 493 KB

english, 2003

25

An analysis of maleless and histone H4 acetylation in Drosophila melanogaster spermatogenesis

Luca Rastelli, Mitzi I Kuroda

Journal:

Mechanisms of Development

Year:

1998

Language:

english

File:

PDF, 1.62 MB

english, 1998

26

The maleless protein associates with the X chromosome to regulate dosage compensation in drosophila

Mitzi I. Kuroda, Maurice J. Kernan, Robert Kreber, Barry Ganetzky, Bruce S. Baker

Journal:

Year:

1991

Language:

english

File:

PDF, 1.46 MB

english, 1991

27

napts, a Mutation affecting sodium channel activity in Drosophila, Is an allele of mle a regulator of X chromosome transcription

Maurice J. Kernan, Mitzi I. Kuroda, Robert Kreber, Bruce S. Baker, Barry Ganetzky

Journal:

Year:

1991

Language:

english

File:

PDF, 1.26 MB

english, 1991

28

Regulation of the sex-specific binding of the maleless dosage compensation protein to the male X chromosome in Drosophila

Monica Gorman, Mitzi I. Kuroda, Bruce S. Baker

Journal:

Year:

1993

Language:

english

File:

PDF, 9.63 MB

english, 1993

29

The dosage compensation regulators MLE, MSL-1 and MSL-2 are interdependent since early embryogenesis in Drosophila

Luca Rastelli, Ron Richman, Mitzi I. Kuroda

Journal:

Mechanisms of Development

Year:

1995

Language:

english

File:

PDF, 1.45 MB

english, 1995

30

Chromatin proteins captured by ChIP–mass spectrometry are linked to dosage compensation in Drosophila

Wang, Charlotte I, Alekseyenko, Artyom A, LeRoy, Gary, Elia, Andrew EH, Gorchakov, Andrey A, Britton, Laura-Mae P, Elledge, Stephen J, Kharchenko, Peter V, Garcia, Benjamin A, Kuroda, Mitzi I

Journal:

Nature Structural and Molecular Biology

Year:

2013

Language:

english

File:

PDF, 1.17 MB

english, 2013

31

Transcriptional control of a whole chromosome: emerging models for dosage compensation

Ferrari, Francesco, Alekseyenko, Artyom A, Park, Peter J, Kuroda, Mitzi I

Journal:

Nature Structural and Molecular Biology

Year:

2014

Language:

english

File:

PDF, 1.18 MB

english, 2014

32

“Jump Start and Gain” Model for Dosage Compensation in Drosophila Based on Direct Sequencing of Nascent Transcripts

Ferrari, Francesco, Plachetka, Annette, Alekseyenko, Artyom A., Jung, Youngsook L., Ozsolak, Fatih, Kharchenko, Peter V., Park, Peter J., Kuroda, Mitzi I.

Journal:

Year:

2013

File:

PDF, 78 KB

2013

33

“Jump Start and Gain” Model for Dosage Compensation in Drosophila Based on Direct Sequencing of Nascent Transcripts

Ferrari, Francesco, Plachetka, Annette, Alekseyenko, Artyom A., Jung, Youngsook L., Ozsolak, Fatih, Kharchenko, Peter V., Park, Peter J., Kuroda, Mitzi I.

Journal:

Year:

2013

Language:

english

File:

PDF, 708 KB

english, 2013

34

[Part 1: Biological Sciences] || Transcription Termination in vitro at the Tryptophan Operon Attenuator is Controlled by Secondary Structures in the Leader Transcript

Iwona Stroynowski, Mitzi Kuroda and Charles Yanofsky

Journal:

Proceedings of the National Academy of Sciences

Year:

1983

Language:

english

File:

PDF, 1.50 MB

english, 1983

35

The mtr Locus is a Two-Gene Operon Required for Transcription Attenuation in the trp Operon of Bacillus subtilis

Paul Gollnick, Shuichi Ishino, Mitzi I. Kuroda, Dennis J. Henner and Charles Yanofsky

Journal:

Proceedings of the National Academy of Sciences

Year:

1990

Language:

english

File:

PDF, 994 KB

english, 1990

36

Sex comb on midleg (Scm) is a functional link between PcG-repressive complexes in Drosophila

Kang, Hyuckjoon, McElroy, Kyle A., Jung, Youngsook Lucy, Alekseyenko, Artyom A., Zee, Barry M., Park, Peter J., Kuroda, Mitzi I.

Journal:

Genes & Development

Year:

2015

Language:

english

File:

PDF, 1.23 MB

english, 2015

37

Identification of Chromatin-Associated Regulators of MSL Complex Targeting in Drosophila Dosage Compensation

Larschan, Erica, Soruco, Marcela M. L., Lee, Ok-Kyung, Peng, Shouyong, Bishop, Eric, Chery, Jessica, Goebel, Karen, Feng, Jessica, Park, Peter J., Kuroda, Mitzi I., Brehm, Alexander

Journal:

Year:

2012

Language:

english

File:

PDF, 900 KB

english, 2012

38

Evidence of Activity-Specific, Radial Organization of Mitotic Chromosomes in Drosophila

Strukov, Yuri G., Sural, Tûba H., Kuroda, Mitzi I., Sedat, John W., Misteli, Tom

Journal:

Year:

2011

Language:

english

File:

PDF, 3.80 MB

english, 2011

39

The oncogenic BRD4-NUT chromatin regulator drives aberrant transcription within large topological domains

Alekseyenko, Artyom A., Walsh, Erica M., Wang, Xin, Grayson, Adlai R., Hsi, Peter T., Kharchenko, Peter V., Kuroda, Mitzi I., French, Christopher A.

Journal:

Genes & Development

Year:

2015

Language:

english

File:

PDF, 938 KB

english, 2015

40

Streamlined discovery of cross-linked chromatin complexes and associated histone modifications by mass spectrometry

Zee, Barry M., Alekseyenko, Artyom A., McElroy, Kyle A., Kuroda, Mitzi I.

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 848 KB

english, 2016

41

Variable Splicing of Noncoding roX2 RNAs Influences Targeting of MSL Dosage Compensation Complexes in Drosophila

Park, Yongkyu, Oh, Hyangyee, Meller, Victoria H., Kuroda, Mitzi I.

Journal:

Year:

2005

Language:

english

File:

PDF, 1.12 MB

english, 2005

42

Correspondence of Drosophila Polycomb Group proteins with broad H3K27me3 silent domains

Jung, Youngsook L., Kang, Hyuckjoon, Park, Peter J., Kuroda, Mitzi I.

Journal:

Year:

2016

Language:

english

File:

PDF, 701 KB

english, 2016

43

Ectopic protein interactions within BRD4–chromatin complexes drive oncogenic megadomain formation in NUT midline carcinoma

Alekseyenko, Artyom A., Walsh, Erica M., Zee, Barry M., Pakozdi, Tibor, Hsi, Peter, Lemieux, Madeleine E., Dal Cin, Paola, Ince, Tan A., Kharchenko, Peter V., Kuroda, Mitzi I., French, Christopher A.

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 1.29 MB

english, 2017

44

Bivalent complexes of PRC1 with orthologs of BRD4 and MOZ/MORF target developmental genes in Drosophila

Kang, Hyuckjoon, Jung, Youngsook L., McElroy, Kyle A., Zee, Barry M., Wallace, Heather A., Woolnough, Jessica L., Park, Peter J., Kuroda, Mitzi I.

Journal:

Genes & Development

Year:

2017

Language:

english

File:

PDF, 14.35 MB

english, 2017

45

upSET , the Drosophila homologue of SET3, Is Required for Viability and the Proper Balance of Active and Repressive Chromatin Marks

McElroy, Kyle A., Jung, Youngsook L., Zee, Barry M., Wang, Charlotte I., Park, Peter J., Kuroda, Mitzi I.

Journal:

G3 Genes|Genome|Genetics

Year:

2017

Language:

english

File:

PDF, 1.89 MB

english, 2017

46

'Z4' Complex Member Fusions in NUT Carcinoma: Implications for a Novel Oncogenic Mechanism

Shiota, Hitoshi, Elya, Janine E, Alekseyenko, Artyom, Chou, Pauline M., Gorman, Shelby A, Barbash, Olena, Becht, Kelly, Danga, Kristina, Kuroda, Mitzi I., Nardi, Valentina, French, Christopher A.

Journal:

Molecular Cancer Research

Year:

2018

Language:

english

File:

PDF, 4.06 MB

english, 2018

47

Sex-specific phenotypes of histone H4 point mutants establish dosage compensation as the critical function of H4K16 acetylation in Drosophila

Copur, Ömer, Gorchakov, Andrey, Finkl, Katja, Kuroda, Mitzi I., Müller, Jürg

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 1.13 MB

english, 2018

48

Combination Targeting of the Bromodomain and Acetyltransferase Active Site of p300/CBP

Zucconi, Beth, Makofske, Jessica, Meyers, David, Hwang, Yousang, Wu, Mingxuan, Kuroda, Mitzi, Cole, Philip A

Journal:

Year:

2019

Language:

english

File:

PDF, 1.80 MB

english, 2019

49

Dynamic Competition of Polycomb and Trithorax in Transcriptional Programming

Kuroda, Mitzi I., Kang, Hyuckjoon, De, Sandip, Kassis, Judith A.

Journal:

Annual Review of Biochemistry

Year:

2020

File:

PDF, 1.34 MB

2020